Publications

Article
Xiao, J., Bozkurt, A., Nichols, M., Pazurek, A., Stracke, C.M., Bai, J.Y.H., Farrow, R., Mulligan, D., Nerantzi, C., Sharma, R.C., Singh, L., Frumin, I., Swindell, A., Honeychurch, S., Bond, M., Dron, J., Moore, S., Leng, J., Slagter van Tryon, P.J., Garcia, M., Terentev, E., Tlili, A., Chiu, T.K.F., Hodges, C.B., Jandrić, P., Sidorkin, A., Crompton, H., Hrastinski, S., Koutropoulos, A., Cukurova, M., Shea, P., Watson, S., Zhang, K., Lee, K., Costello, E., Sharples, M., Vorochkov, A., Alexander, B., Bali, M., Moore, R.L., Zawacki-Richter, O., Asino, T.I., Huijser, H., Zheng, C., Sani-Bozkurt, S., Duart, J.M. and Themeli, C.
Venturing into the unknown: Critical insights into grey areas and pioneering future directions in educational generative AI research
In: TechTrends, Volume 69, pages 582–597.
Date of publication: 19 February, 2025

Article
Kozlovskii, I. and Popov, P.
Computational methods for binding site prediction on macromolecules.
In: Quarterly Reviews of Biophysics, 58, p.e12.
Date of publication: 12 March, 2025

Article
Dlamini, G., Huraira, A., Kholmatova, Z., Mikriukov, A., Safiullina, G., Succi, G. and Tormasov, A.
A systematic literature review on measuring brain activity while reviewing code and paintings
In: IEEE Access, Volume 13
Date of publication: 17 April, 2025

Article
Maevskiy A., Carvalho A., Sataev E., Turchyna V., Noori K., Rodin A., Castro Neto A. H., and Ustyuzhanin A.
Predicting ionic conductivity in solids from the machine-learned potential energy landscape
In: Physical Review Research 7.2 (2025): 023167.
Date of publication: 19 May, 2025

Conference paper
Anbar, F., Mikriukov, A., Plaksin, Y., Sitnikov, V., Succi, G., Tormasov, A. and Trofimova, E.
Towards ordinal data in LLM evaluation meta-analysis: A non-parametric perspective
In: 2025 IEEE 6th International Conference on Pattern Recognition and Machine Learning (PRML) (pp. 335-339). IEEE.
Date of publication: 13 June, 2025

Article
Zhang, P., Wang, Q., Zhang, Y., Lin, M., Zhou, X., David, A., Ustyuzhanin, A., Chen, M., Katsnelson, M.I., Trubyanov, M., and Novoselov
Strain-induced crumpling of graphene oxide lamellas to achieve fast and selective transport of H2 and CO2
In: Nature Nanotechnology, pp.1-8.
Date of publication: 14 July, 2025

Article
Buyanov, I., Sarycheva, A., and Popov, P.
OrgNet: Orientation-gnostic protein stability assessment using convolutional neural networks.
In: Bioinformatics, Volume 41, Issue Supplement_1, July 2025, Pages i458–i465
Date of publication: 15 July, 2025

Article
Rodin, A., Olsen, B. A., Ustyuzhanin, A., & Maevskiy, A.
Time-local stochastic equation of motion for solid ionic electrolytes
In: Physical Review Research 7.3 (2025): 033120.
Date of publication: 4 August, 2025

Conference paper
Mikriukov, A., Senokosov, A., Succi, G., Tormasov, A., Plaksin, Y., Trofimova, E. and Sitnikov, V.
AI Tools for Automating Systematic Literature Reviews
In: Proceedings of the 2025 International Conference on Software Engineering and Computer Applications (pp. 25-30).
Date of publication: 27 August, 2025

Article
Frumin, I. and Kalgin, A.
Digital Transformation and Growth in Germany’s Private Higher Education
In: International Higher Education, Issue 22
Date of publication: 3 September, 2025

Conference paper
Ferrario, G., Mikriukov, A., Plaksin, Y., Sitnikov, V., Succi, G., Tormasov, A., & Trofimova, E.
Evaluating cost-effectiveness and coherence of LLMs for supplement recommendations using routing techniques
In: 2025 10th International Conference on Machine Learning Technologies (ICMLT) (pp. 350-354). IEEE.
Date of publication: 13 October, 2025

Conference paper
Mikriukov, A., Plaksin, Y., Ravveduto, A., Succi, G., Tormasov, A. and Trofimova, E.
Auto-Configuration of the Constructor Research Platform
In: Proceedings of the Future Technologies Conference (pp. 616-621). Cham: Springer Nature Switzerland.
Date of publication: 16 October, 2025

Conference paper
Ciancarini, P., Farina, M., Mikriukov, A., Succi, G., Tulkunova, N., Tormasov, A., Thapaliya, A. and Zuev, E
A Systemic Perspective on Software Engineering
In: Proceedings of the 2025 18th International Conference on Computer Science and Information Technology (pp. 91-97), Bilbao, Spain.
Date of publication: 27 October, 2025

Conference paper
Anbar, F., Mikriukov, A., Plaksin, Y., Sitnikov, V., Succi, G., Tormasov, A. and Trofimova, E.
Toward an understanding of the self-coherence and the cross-coherence of LLMs — An empirical investigation
In: International Conference on Computer and Communication Engineering (pp. 127-137).
Date of publication: 10 November, 2025

Article
Frumin, I., Vorochkov, A., Kiryushina, M., Platonova, D., & Terentiev, E.
Mapping the Generative AI Research in Higher Education
In: Higher Education Quarterly, 80(1), p.e70075.
Date of publication: 14 November, 2025

Article
M. Y. Lukianov, A. Maevskiy, A. Ustyuzhanin et al.
Inverse design of broadband antennas for terahertz devices based on two-dimensional materials
In: APS, Physical Review Applied, 24(5), 054079.
Date of publication: 25 November, 2025

Article
Rehders, M., Alekseitseva, K., Gissoni, J., Doğru, A.G., Popov, P., Boiarov, A. and Brix, K.
CU Cilia – An Application for Image Analysis by Machine Learning – Reveals Significance of Cysteine Cathepsin K Activity for Primary Cilia of Human Thyroid Epithelial Cells
In: Frontiers in Endocrinology, Sec. Thyroid Endocrinology, Volume 16, 2025
Date of publication: 27 November, 2025

Conference paper
Mikriukov, A., Plaksin, Y., Ravveduto, A., Snigireva, M., Succi, G., Tormasov, A., & Trofimova, E.
A preliminary analysis of the current limitation and future directions of AI applied to the legal domain based on a SLR
In: 2025 International Conference on Data Science and Intelligent Systems (DSIS) (pp. 1-10). IEEE.
Date of publication: 28 November, 2025

Article
Bozkurt, A., Xiao, J., Farrow, R., Bai, J.Y.H., Nerantzi, C., Moore, S., Dron, J., Stracke, C.M., Singh, L., Crompton, H., Koutropoulos, A., Terentev, E., Pazurek, A., Nichols, M., Sidorkin, A.M., Costello, E., Watson, S., Mulligan, D., Honeychurch, S., Hodges, C.B., Sharples, M., Swindell, A., Frumin, I., Tlili, A., Slagter van Tryon, P.J., Bond, M., Bali, M., Leng, J., Zhang, K., Cukurova, M., Chiu, T.K.F., Lee, K., Hrastinski, S., Garcia, M.B., Sharma, R.C., Alexander, B., Zawacki-Richter, O., Huijser, H., Jandrić, P., Zheng, C., Shea, P., Duart, J.M., Themelis, C., Vorochkov, A., Sani-Bozkurt, S., Moore, R.L. and Asino, T.I.
The manifesto for teaching and learning in a time of generative AI: A critical collective stance to better navigate the future
In: Open Praxis, 16(4), pp. 487–513
Date of publication: 29 November, 2025

Conference paper
Adashchik, A., Huraira, A., Kholmatova, Z., Mikriukov, A., Ravveduto, A., Snigireva, M., Succi, G., Tormasov, A. and Trofimova, E.
Agentic LLM Pipelines for Reproducible Scientific Software: Opportunities and Challenges
In: Proceedings of the 2025 9th International Conference on Computer Science and Artificial Intelligence (pp. 38-46)
Date of publication: 12 December, 2025
Preprint
A. Ustyuzhanin, M. Lazarev
Symbolic regression for defect interactions in 2D materials
In: Materials & Design, Volume 264
Date of publication: 23 February, 2026

 

Conference paper
Kuzmin, D., Snigireva, M., Tulkunova, N., Tormasov, A. and Zuev, E.
A Preliminary Analysis of the Presence of Wicked and Tamed Projects in Software Engineering
In: Proceedings of the 2025 9th International Conference on Software and e-Business (pp. 79-85)
Date of publication: 17 March, 2026